PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KXZ46814.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Gonium
Family C3H
Protein Properties Length: 2344aa    MW: 236522 Da    PI: 7.8666
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KXZ46814.1genomeGPGRPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH26.41.2e-0820872107425
                  ---SGGGGTS--TTTTT-SS-S CS
     zf-CCCH    4 elCrffartGtCkyGdrCkFaH 25  
                  ++Crff++ G+C+ G+rC+FaH
  KXZ46814.1 2087 RICRFFLQ-GYCRDGERCRFAH 2107
                  79******.************* PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5029711.665191231IPR020683Ankyrin repeat-containing domain
PfamPF000232.6E-4191222IPR002110Ankyrin repeat
PROSITE profilePS5008811.247191223IPR002110Ankyrin repeat
Gene3DG3DSA:1.25.40.202.3E-6191232IPR020683Ankyrin repeat-containing domain
SuperFamilySSF484034.2E-6191232IPR020683Ankyrin repeat-containing domain
CDDcd002045.60E-5191228No hitNo description
SMARTSM002480.0022191220IPR002110Ankyrin repeat
PROSITE profilePS5010314.05120832110IPR000571Zinc finger, CCCH-type
SMARTSM003560.002220842109IPR000571Zinc finger, CCCH-type
SuperFamilySSF902291.37E-520862107IPR000571Zinc finger, CCCH-type
Gene3DG3DSA:4.10.1000.108.9E-620872107IPR000571Zinc finger, CCCH-type
PfamPF006423.1E-620872107IPR000571Zinc finger, CCCH-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005515Molecular Functionprotein binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 2344 aa     Download sequence    Send to blast
MAESTQVPGS DGMYGSRRSR LQKVETKLSQ SLDSEDRRVK ELTEGILYDF LPAALNVMLP  60
RCEDPLQELD ADRCRAVASA ALAVSALMNA PPGFLEFLLC VPWRKLSQLY PKSDSIDKLV  120
SNLQVTDEER RKLVNTRIDP ALMNTVLDFL YKEKHLDSVP PMLQLTPINN LQLDDKSVPV  180
VGRETVAAVL DGATPLHCAA LRGNPAQVDH LLYCGADPTL KTAAGELPVE LVPVCGDRAP  240
GGGASPAARA CRCMGPHDQE VWECRSRLAR SLIARRCFFC FRVGLFSWLR LVLFCLLCLL  300
GQAGRHITIS RPIVERHIDT RRQQKIAAAR ARAHALVTRM RSEAEAGRTH LTQAKRECME  360
SAAFQRGPPD ISQMCFTDPT KSPPPPTLPI SQIHDINLHL QESGTSSTGE ELASEKAFKC  420
FVRSVHALQS LDLHGETVPQ VFAELVQAGS MESRETHVLE DEQADLYSCW AESVLLKFRG  480
CTCPGCATLA IQAVRMAHMQ ATRLFGKVDR LKQTHAERWQ AVGQALARVV YVHICLLLET  540
EAQASPTRSL VFRAETCLRE WDRLEKAGLT QGAGVLDPRH VAALQRWAKT ADSDLYLAEA  600
LHGQSLLPSK TLQEVVISSV THSPDGLPIL ARPVNGEVVA ALEQAITLAS LPSPLLAHIV  660
RSVVNNAVAE LAAAARLREL VGSKGAAALG GGGTSEAVAA LTEALRAAEP FRERLGPEYD  720
AATELRSKWT QRATAVEKLE GAVEDVRAYA SAHPLSFTLA AAAAAAVAQG PRQEGSAAAT  780
AAASSRVSGS GSAEAGDSSV GESGGSCTGT ARSSADGAPA ADLVEWDRRI KQLEQAMNDA  840
KDANVSVTKA KRLLKEMTAI AAAAEASRHL EAVMARRPSG PLQLKLALNR AEAAASSLSG  900
LGGPPTPGLA DVLGPLMAAA RRRLDTERAA EALSKAAASF RTLADLGRLE AAIYNAKKIG  960
AEELDPESYR TSLELRAQLQ EAARVRGVLE TALRNLQNQL RTEDAEALER ALQDAAKWED  1020
LLAADTAKAR KALEQWRCMT VSDAKLARLL REGASTGGLA KAIQEAAASG VKVQHAKRVL  1080
KLMQALETAL ASASGADTGA AERHSLVKSK LDAAEAGGVT TGPLPEAARR MLTRLAATIA  1140
REALEAALKP HSDWSINHRV SVLREALERT EGVLGEEDGA ASGAADVSER PPSRQLANGT  1200
AGSGGKGSGS SRGKRSSGGS SGSGGDVHGG PEDSCASAST ASTPSCLASC STSCSSSGSG  1260
SAGGSGLADD EVVVAVRALA RKARLVLEED QAELARIERE RQEAERARKE AQERERQERQ  1320
RQEQERQKRE KAEAAERERA LADKREKAKA EKARQQQQQK QQQLEQAQQQ KSKAAAAEAS  1380
SASVAGGTER AGGKGSNGKH GQARGANSAA AQAAAAAAGA SNGRPGAAAG SGASAAGKTG  1440
LQRDAPVLAQ AAPPTSAKLA DPPAANMFTA PAGPAVAAAA AGAGVRDGAP PAKQRPRPSG  1500
GAQAAIATAP CTVVSAAAAI HSRGDSLESL GEVVHKLNKD VIDALDMDSD TVRGLAPGPA  1560
GPSPAVGAAS GSGGGSTVTP PLGRGSASGG GSFGRSGSGA AATLEGVLDL PPSQRTSSFM  1620
SSVASADDVM LHGVGGLGGG APAGGGLGFG SAPGGAVLGG GPSLSTISTG QASTADGGGS  1680
SGGGAAVVAA EAGVRTPPAG AAAGSALGGG GPVSPELGPA SSGAAAANSV GSTGATQTAK  1740
PRFGFVDLGG ASWGLDSPSF GQLSGNAGTG ALFPSLQPSG IGDYGAILGG AKPEAANGWP  1800
TVTSLGAGTG VGVGIGSMAY GGPLAGQNGG LVGSPEDDAA AALLAAAGRQ PGAGMQGPGG  1860
AGGAGSGGQA VLGSAGVGSL GGLQILTDES SLGPLMGVSL ASPRSSVGAA GAGIQGLLRV  1920
RPLGGAGQLA GVTGRSSLTL QASPPSVLAS QQNGAGGMGA RCGFWTPPSF QSAQGDLGAD  1980
GGGAAATAAA LAGAGPGLGA SLQQQQQQAG LHLVLGGGGG VNGLQLVDWP QQLQQQQLGQ  2040
QQLQELPGGL QLLHLGPGTG TTSSTISGAV GTGAQVLRGA GTAAVSRICR FFLQGYCRDG  2100
ERCRFAHLGA APTSPPTGRG GALTAAQLMQ LGASAHAQHQ MLSQTGGSGT AAAGGGGFGP  2160
SMQGGGGPTG GGGLIVANVG QGSAVGSFAF GAPGAEAFAP LGGELHAKAA GRLGMGMGGP  2220
AGGSGGASMA GLSAALPVGM SAGGGGSGSG TPGLVGQQQT LQIRDNTTGA TFPAILSPVA  2280
QIGAGQQALP VAPPGATGAA TLQAPQSPQQ QQQQLLLSLP DDLTFSPPPA AGPLQGAGAG  2340
SKKK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002950231.10.0hypothetical protein VOLCADRAFT_90642
TrEMBLA0A150GAF50.0A0A150GAF5_GONPE; Uncharacterized protein
STRINGEDP015130.0(Chlamydomonas reinhardtii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP816433